Skip to main content
Ctrl+K

mutcleaner 0.8.0 documentation

  • User Guide
  • API Reference
  • User Guide
  • API Reference

Section Navigation

  • mutcleaner.cleaners
    • mutcleaner.cleaners.antitoxin_pard3_cleaner
    • mutcleaner.cleaners.antitoxin_pard3_custom_cleaners
    • mutcleaner.cleaners.archstabms_1e10_custom_cleaners
    • mutcleaner.cleaners.archstabms_1e10_sup4_cleaner
    • mutcleaner.cleaners.archstabms_1e10_sup5_cleaner
    • mutcleaner.cleaners.base_config
    • mutcleaner.cleaners.basic_cleaners
    • mutcleaner.cleaners.cdna_proteolysis_cleaner
    • mutcleaner.cleaners.cdna_proteolysis_custom_cleaners
    • mutcleaner.cleaners.chitosanase_dtm_cleaner
    • mutcleaner.cleaners.chitosanase_dtm_custom_cleaner
    • mutcleaner.cleaners.codon_cdna_proteolysis_cleaner
    • mutcleaner.cleaners.ctxm_cleaner
    • mutcleaner.cleaners.ctxm_custom_cleaner
    • mutcleaner.cleaners.ddg_dtm_cleaners
    • mutcleaner.cleaners.human_domainome_custom_cleaners
    • mutcleaner.cleaners.human_domainome_sup2_cleaner
    • mutcleaner.cleaners.human_domainome_sup4_cleaner
    • mutcleaner.cleaners.human_myoglobin_cleaner
    • mutcleaner.cleaners.human_myoglobin_custom_cleaners
    • mutcleaner.cleaners.mgnify_ddg_cleaner
    • mutcleaner.cleaners.proteingym_dms_substitutions_cleaner
    • mutcleaner.cleaners.proteingym_dms_substitutions_custom_cleaners
    • mutcleaner.cleaners.rbd_ace2_cleaner
    • mutcleaner.cleaners.rbd_antibody_cleaner
    • mutcleaner.cleaners.rbd_custom_cleaner
    • mutcleaner.cleaners.trpb_cleaner
  • mutcleaner.core
    • mutcleaner.core.alphabet
    • mutcleaner.core.codon
    • mutcleaner.core.constants
    • mutcleaner.core.dataset
    • mutcleaner.core.mutation
    • mutcleaner.core.pipeline
    • mutcleaner.core.sequence
    • mutcleaner.core.types
  • mutcleaner.utils
    • mutcleaner.utils.cleaner_workers
    • mutcleaner.utils.data_source
    • mutcleaner.utils.dataset_builders
    • mutcleaner.utils.label_resolvers
    • mutcleaner.utils.mutation_converter
    • mutcleaner.utils.raw_data_downloader
    • mutcleaner.utils.sequence_io
    • mutcleaner.utils.type_converter
  • API Reference

API Reference#

mutcleaner.cleaners

Dataset-specific cleaning pipelines for MutCleaner.

mutcleaner.core

Core functionality for sequence manipulation

mutcleaner.utils

Utility functions for mutation and sequence processing.

Show Source

© Copyright 2026, Ziyu Shi, Yuxiang Tang.

Created using Sphinx 9.1.0.

Built with the PyData Sphinx Theme 0.20.0.